Genome Engineering and Agriculture: Opportunities and Challenges.

Baltes NJ, Gil-Humanes J, Voytas DF.
Prog Mol Biol Transl Sci. 2017;149:1-26. doi: 10.1016/bs.pmbts.2017.03.011. Epub 2017 May 3.

High-efficiency gene targeting in hexaploid wheat using DNA replicons and CRISPR/Cas9.

Gil-Humanes J, Wang Y, Liang Z, Shan Q, Ozuna CV, Sánchez-León S, Baltes NJ, Starker C, Barro F, Gao C, Voytas DF.
Plant J. 2017 Mar;89(6):1251-1262. doi: 10.1111/tpj.13446. Epub 2017 Feb 13.

Direct stacking of sequence-specific nuclease-induced mutations to produce high oleic and low linolenic soybean oil.

Demorest ZL, Coffman A, Baltes NJ, Stoddard TJ, Clasen BM, Luo S, Retterath A, Yabandith A, Gamo ME, Bissen J, Mathis L, Voytas DF, Zhang F.
BMC Plant Biol. 2016 Oct 13;16(1):225. doi :

Targeted Mutagenesis in Plant Cells through Transformation of Sequence-Specified Nuclease mRNA

Stoddard TJ, Clasen BM, Baltes NJ, Demorest ZL, Voytas DF, Zhang F, Luo S
2016 PLoS ONE 11(5): e0154634. doi:

Non-transgenic Plant Genome Editing Using Purified Sequence-Specific Nucleases

Song Luo, Jin Li, Thomas J. Stoddard, Nicholas J. Baltes, Zachary L. Demorest, Benjamin M. Clasen, Andrew Coffman, Adam Retterath, Luc Mathis, Daniel F. Voytas, Feng Zhang
2015 Molecular Plant: Volume 8, Issue 9, p1425–1427, 7 September 2015

Improving cold storage and processing traits in potato through targeted gene knockout

Benjamin M. Clasen, Thomas J. Stoddard, Song Luo, Zachary L. Demorest, Jin Li, Frederic Cedrone, Redeat Tibebu, Shawn Davison, Erin E. Ray, Aurelie Daulhac, Andrew Coffman, Ann Yabandith, Adam Retterath, William Haun, Nicholas J. Baltes, Luc Mathis, Daniel F. Voytas and Feng Zhang (2015) Plant Biotechnology Journal
Article first published online: 7 APR 2015 | DOI: 10.1111/pbi.12370

Advances in New Technology for Targeted Modification of Plant Genomes

Editors: Zhang, Feng, Puchta, Holger, Thomson, James G. (Eds.)
Publisher:  Springer New York 2015

Multiplexed, targeted gene editing in Nicotiana Benthamiana for glyco-engineering and monoclonal antibody production

Jin Li, Thomas J. Stoddard, Zachary L. Demorest, Pierre-Olivier Lavoie, Song Luo, Benjamin M. Clasen, Frederic Cedrone, Erin E. Ray, Andrew P. Coffman, Aurelie Daulhac, Ann Yabandith, Adam J. Retterath, Luc Mathis, Daniel F. Voytas, Marc-André D’Aoust and Feng Zhang (2015) Plant Biotechnology Journal
Article first published online: 25 MAY 2015 | DOI: 10.1111/pbi.12403

Targeting DNA double-strand breaks with TAL effector nucleases

M Christian, T Cermak, EL Doyle, C Schmidt, F Zhang, A Hummel, AJ Bogdanove, DF Voytas. (2010)Genetics 186 (2), 757-761

Improved soybean oil quality by targeted mutagenesis of the fatty acid desaturase 2 gene family.

Haun W., Coffman A., Clasen B.M., Demorest Z.L., Lowy A., Ray E., Retterath A., Stoddard T., Juillerat A., Cedrone F., Mathis L., Voytas D.F. and Zhang F. (2014) Plant Biotechnol. J., doi:10.1111/pbi.12201

Transcription activator-like effector nucleases enable efficient plant genome engineering

Y Zhang, F Zhang, X Li, JA Baller, Y Qi, CG Starker, AJ Bogdanove, DF Voytas. (2013) Plant Physiology 161(1) 20-27

Genome engineering empowers the diatom Phaeodactylum tricornutum for biotechnology

Daboussi F, Leduc S, Maréchal A, Dubois G, Guyot V, Perez-Michaut C, Amato A, Falciatore A, Juillerat A, Beurdeley M, Voytas DF, Cavarec L, Duchateau P. (2014) Nature Commun 5:3831

Compact designer TALENs for efficient genome engineering

Compact designer TALENs for efficient genome engineering. Beurdeley M, Bietz F, Li J, Stoddard T, Juillerat A, Zhang F, Voytas DF, Duchateau P, Silva GH. (2013) Nature Common 4: 1762.

Targeted deletion and inversion of tandemly arrayed genes in Arabidopsis thaliana using zinc finger nucleases

Y Qi, X Li, Y Zhang, CG Starker, NJ Baltes, F Zhang, JD Sander, D Reyon, .JK Joung and DF Voytas. (2013) G3: Genes| Genomes| Genetics 3 (10), 1707-1715

Increasing frequencies of site-specific mutagenesis and gene targeting in Arabidopsis by manipulating DNA repair pathways.

Y Qi, Y Zhang, F Zhang, JA Baller, SC Cleland, Y Ryu, CG Starker, DF Voytas. (2013) Genome Research 23(3) 547-554